Examples of pku.cbi.abcgrid.master.service.HMMER.hmmpfam$Fragmenter

Package pku.cbi.abcgrid.master.service.HMMER

Examples of pku.cbi.abcgrid.master.service.HMMER.hmmpfam$Fragmenter

pku.cbi.abcgrid.master.service.HMMER.hmmpfam
search a HMM database for matches to a query seqyence file.
hmmpfam [options] hmm_database query_file 2>output 1>error
query_file should be fragmented to multiple sequence files.

        apps.put(s.getAppName(), s);


        //s = new DaliLite();
        //services.put(s.getAppName(), s);


        s = new hmmpfam();
        apps.put(s.getAppName(), s);
    }

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