*/
private void initialize() {
fastqWriterFactory.setCreateMd5(CREATE_MD5_FILE);
switch (READ_NAME_FORMAT) {
case CASAVA_1_8:
readNameEncoder = new Casava18ReadNameEncoder(MACHINE_NAME, RUN_BARCODE, FLOWCELL_BARCODE);
break;
case ILLUMINA:
readNameEncoder = new IlluminaReadNameEncoder(RUN_BARCODE);
break;
}