Examples of org.sbml.jsbml.ListOf

org.sbml.jsbml.ListOf
This list implementation is a Java {@link List} that extends{@link AbstractSBase}. It represents the listOfxxx XML elements in a SBML file. Unfortunately, there is no way for multiple inheritance in Java. @author Nicolas Rodriguez @author Marine Dumousseau @author Andreas Dräger @since 0.8 @version $Rev: 1533 $

          }
        } else if (contextObject instanceof Reaction) {
          Reaction reaction = (Reaction) contextObject;


          if (elementName.equals("listOfReactants")) {
            ListOf listOfReactants = (ListOf) newContextObject;
            reaction.setListOfReactants(listOfReactants);
            listOfReactants
                .setSBaseListType(ListOf.Type.listOfReactants);


            return listOfReactants;
          } else if (elementName.equals("listOfProducts")) {
            ListOf listOfProducts = (ListOf) newContextObject;
            reaction.setListOfProducts(listOfProducts);
            listOfProducts
                .setSBaseListType(ListOf.Type.listOfProducts);


            return listOfProducts;
          } else if (elementName.equals("kineticLaw")) {
            KineticLaw kineticLaw = (KineticLaw) newContextObject;
            reaction.setKineticLaw(kineticLaw);


            return kineticLaw;
          } else {
            // TODO: SBML syntax error, throw an exception?
          }
        } else if (contextObject instanceof KineticLaw) {
          KineticLaw kineticLaw = (KineticLaw) contextObject;


          if (elementName.equals("listOfParameters")) {
            ListOf listOfLocalParameters = (ListOf) newContextObject;
            kineticLaw
                .setListOfLocalParameters(listOfLocalParameters);
            listOfLocalParameters
                .setSBaseListType(ListOf.Type.listOfParameters);


            return listOfLocalParameters;
          } else {
            // TODO: SBML syntax error, throw an exception?

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          }
        } else if (contextObject instanceof Reaction) {
          Reaction reaction = (Reaction) contextObject;


          if (elementName.equals("listOfReactants")) {
            ListOf listOfReactants = (ListOf) newContextObject;
            reaction.setListOfReactants(listOfReactants);
            listOfReactants
                .setSBaseListType(ListOf.Type.listOfReactants);


            return listOfReactants;
          } else if (elementName.equals("listOfProducts")) {
            ListOf listOfProducts = (ListOf) newContextObject;
            reaction.setListOfProducts(listOfProducts);
            listOfProducts
                .setSBaseListType(ListOf.Type.listOfProducts);


            return listOfProducts;
          } else if (elementName.equals("kineticLaw")) {
            KineticLaw kineticLaw = (KineticLaw) newContextObject;
            reaction.setKineticLaw(kineticLaw);


            return kineticLaw;
          } else {
            // TODO : SBML syntax error, throw an exception?
          }
        } else if (contextObject instanceof KineticLaw) {
          KineticLaw kineticLaw = (KineticLaw) contextObject;


          if (elementName.equals("listOfParameters")) {
            ListOf listOfLocalParameters = (ListOf) newContextObject;
            kineticLaw
                .setListOfLocalParameters(listOfLocalParameters);
            listOfLocalParameters
                .setSBaseListType(ListOf.Type.listOfParameters);


            return listOfLocalParameters;
          } else {
            // TODO : SBML syntax error, throw an exception?

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          }
        } else if (contextObject instanceof Reaction) {
          Reaction reaction = (Reaction) contextObject;


          if (elementName.equals("listOfReactants")) {
            ListOf listOfReactants = (ListOf) newContextObject;
            reaction.setListOfReactants(listOfReactants);
            listOfReactants
                .setSBaseListType(ListOf.Type.listOfReactants);


            return listOfReactants;
          } else if (elementName.equals("listOfProducts")) {
            ListOf listOfProducts = (ListOf) newContextObject;
            reaction.setListOfProducts(listOfProducts);
            listOfProducts
                .setSBaseListType(ListOf.Type.listOfProducts);


            return listOfProducts;
          } else if (elementName.equals("kineticLaw")) {
            KineticLaw kineticLaw = (KineticLaw) newContextObject;
            reaction.setKineticLaw(kineticLaw);


            return kineticLaw;
          } else {
            // TODO : SBML syntax error, throw an exception?
          }
        } else if (contextObject instanceof KineticLaw) {
          KineticLaw kineticLaw = (KineticLaw) contextObject;


          if (elementName.equals("listOfParameters")) {
            ListOf listOfLocalParameters = (ListOf) newContextObject;
            kineticLaw
                .setListOfLocalParameters(listOfLocalParameters);
            listOfLocalParameters
                .setSBaseListType(ListOf.Type.listOfParameters);


            return listOfLocalParameters;
          } else {
            // TODO : SBML syntax error, throw an exception?

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org.apache.log4j.Logger

org.sbml.jsbml.xml.parsers.SBMLLevel1Version1Parser

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