Package org.openscience.cdk.io.listener

Examples of org.openscience.cdk.io.listener.SwingGUIListener


        }
        FileWriter sw = new FileWriter(outFile);
        cow = new CMLWriter(sw);
        if (cow != null && askIOSettings())
        {
            cow.addChemObjectIOListener(new SwingGUIListener(jcpPanel, IOSetting.Importance.HIGH));
        }
        cow.write(object);
        cow.close();
        sw.close();
        if(jcpPanel instanceof JChemPaintPanel)
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            outFile = new File(fileName);
        }
        cow = new SMILESWriter(new FileWriter(outFile));
        if (cow != null && askIOSettings())
        {
            cow.addChemObjectIOListener(new SwingGUIListener(jcpPanel, IOSetting.Importance.HIGH));
        }
        Iterator<IAtomContainer> containers = ChemModelManipulator.getAllAtomContainers(model).iterator();
        IAtomContainerSet som = model.getBuilder().newInstance(IAtomContainerSet.class);
        while (containers.hasNext()) {
            //Clone() is here because the SMILESWriter sets valencies and we don't
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            outFile = new File(fileName);
        }
        cow = new CDKSourceCodeWriter(new FileWriter(outFile));
        if (cow != null && askIOSettings())
        {
            cow.addChemObjectIOListener(new SwingGUIListener(jcpPanel, IOSetting.Importance.HIGH));
        }
        Iterator containers = ChemModelManipulator.getAllAtomContainers(model).iterator();
        while (containers.hasNext()) {
            IAtomContainer ac = (IAtomContainer)containers.next();
            if (ac != null) {
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