Package org.openquark.cal.foreignsupport.module.Sql

Examples of org.openquark.cal.foreignsupport.module.Sql.DatabaseFunction$Conversion

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      for (GraphObject go : content)
      {
        if (go instanceof Conversion)
        {
          Conversion conv = (Conversion) go;
          conversion cnv = conv.getConversion();
          convSet.add(cnv);
        }
      }

      Set<pathwayComponent> components = l2p.getPATHWAY_COMPONENTS();
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      for (GraphObject go : withContent)
      {
        if (go instanceof Conversion)
        {
          Conversion conv = (Conversion) go;
          conversion cnv = conv.getConversion();
          convSet.add(cnv);
        }
      }

      Set<pathwayComponent> components = p.getPATHWAY_COMPONENTS();
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      for (GraphObject go : content)
      {
        if (go instanceof Conversion)
        {
          Conversion conv = (Conversion) go;
          conversion cnv = conv.getConversion();
          convSet.add(cnv);
        }
      }

      Set<pathwayComponent> components = l2p.getPATHWAY_COMPONENTS();

      for (conversion cnv : convSet)
      {
        if (!components.contains(cnv))
        {
          l2p.addPATHWAY_COMPONENTS(cnv);
        }
      }
    }
    else if (l3p != null)
    {
      for (Process pc : new HashSet<Process>(l3p.getPathwayComponent()))
      {
        l3p.removePathwayComponent(pc);
      }

      Set<org.biopax.paxtools.model.level3.Conversion> convSet =
        new HashSet<org.biopax.paxtools.model.level3.Conversion>();

      for (GraphObject go : content)
      {
        if (go instanceof ChbConversion)
        {
          ChbConversion conv = (ChbConversion) go;
          org.biopax.paxtools.model.level3.Conversion cnv = conv.getConversion();
          convSet.add(cnv);
        }
      }

      Set<Process> components = l3p.getPathwayComponent();
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      for (GraphObject go : withContent)
      {
        if (go instanceof Conversion)
        {
          Conversion conv = (Conversion) go;
          conversion cnv = conv.getConversion();
          convSet.add(cnv);
        }
      }

      Set<pathwayComponent> components = p.getPATHWAY_COMPONENTS();
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Related Classes of org.openquark.cal.foreignsupport.module.Sql.DatabaseFunction$Conversion

  • org.eclipse.draw2d.geometry.Dimension
  • org.gvt.action.UpdatePathwayAction
  • org.gvt.model.CompoundModel
  • org.gvt.model.NodeModel
  • org.gvt.util.PathwayHolder
  • spark.spi.rdf.TypedLiteralImpl
  • java.util.UUID
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