Package org.openbel.framework.common.protonetwork.model

Examples of org.openbel.framework.common.protonetwork.model.AnnotationDefinitionTable

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                protoNetwork1.getNamespaceTable().addNamespace(ns, did);
            }

            // union annotation definition values
            Map<Integer, Integer> adremap = new HashMap<Integer, Integer>();
            AnnotationDefinitionTable adt =
                    protoNetwork2.getAnnotationDefinitionTable();
            for (TableAnnotationDefinition ad : adt.getAnnotationDefinitions()) {
                Integer oldDefinitionId = adt.getDefinitionIndex().get(ad);
                Integer newDefinitionId = protoNetwork1
                        .getAnnotationDefinitionTable()
                        .addAnnotationDefinition(ad, did);

                adremap.put(oldDefinitionId, newDefinitionId);
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Related Classes of org.openbel.framework.common.protonetwork.model.AnnotationDefinitionTable

  • org.openbel.framework.common.enums.AnnotationType
  • org.openbel.framework.common.InvalidArgument
  • org.openbel.framework.core.protonetwork.ProtoNetworkMerger
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