Package org.ggf.drmaa

Examples of org.ggf.drmaa.JobTemplate

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      SessionFactory factory = SessionFactory.getFactory();
      Session session = factory.getSession();
     
      try {
         session.init("");
         JobTemplate jt = session.createJobTemplate();
         jt.setRemoteCommand("sleeper.sh");
         jt.setArgs(Collections.singletonList("5"));
        
         String id = session.runJob(jt);
        
         System.out.println("Your job has been submitted with id " + id);
        
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      SessionFactory factory = SessionFactory.getFactory();
      Session session = factory.getSession();
     
      try {
         session.init("");
         JobTemplate jt = session.createJobTemplate();
         jt.setRemoteCommand("sleeper.sh");
         jt.setArgs(Collections.singletonList("5"));
        
         String id = session.runJob(jt);
        
         System.out.println("Your job has been submitted with id " + id);
        
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      SessionFactory factory = SessionFactory.getFactory();
      Session session = factory.getSession();
     
      try {
         session.init("");
         JobTemplate jt = session.createJobTemplate();
         jt.setRemoteCommand("sleeper.sh");
         jt.setArgs(Collections.singletonList("5"));
        
         java.util.List ids = session.runBulkJobs(jt, 1, 30, 2);
         java.util.Iterator i = ids.iterator();
        
         while (i.hasNext()) {
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      SessionFactory factory = SessionFactory.getFactory();
      Session session = factory.getSession();
     
      try {
         session.init("");
         JobTemplate jt = session.createJobTemplate();
         jt.setRemoteCommand("sleeper.sh");
         jt.setArgs(Collections.singletonList("5"));
        
         String id = session.runJob(jt);
        
         System.out.println("Your job has been submitted with id " + id);
        
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      SessionFactory factory = SessionFactory.getFactory();
      Session session = factory.getSession();
     
      try {
         session.init("");
         JobTemplate jt = session.createJobTemplate();
         jt.setRemoteCommand("sleeper.sh");
         jt.setArgs(Collections.singletonList("5"));
        
         List ids = session.runBulkJobs(jt, 1, 30, 2);
         Iterator i = ids.iterator();
        
         while (i.hasNext()) {
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        SessionFactory factory = SessionFactory.getFactory();
       
        session = factory.getSession();
        session.init(null);
       
        JobTemplate jt = createJobTemplate(jobPath, 5, true);
       
        List allJobIds = new LinkedList();
        List jobIds = null;
        boolean retry = true;
       
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            }
        }
    }
   
    private static JobTemplate createJobTemplate(String jobPath, int seconds, boolean isBulkJob) throws DrmaaException {
        JobTemplate jt = session.createJobTemplate();
       
        jt.setWorkingDirectory("$drmaa_hd_ph$");
        jt.setRemoteCommand(jobPath);
        jt.setArgs(Collections.singletonList(Integer.toString(seconds)));
        jt.setJoinFiles(true);
       
        if (!isBulkJob) {
            jt.setOutputPath(":$drmaa_hd_ph$/DRMAA_JOB");
        } else {
            jt.setOutputPath(":$drmaa_hd_ph$/DRMAA_JOB$drmaa_incr_ph$");
        }
       
        return jt;
    }
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      SessionFactory factory = SessionFactory.getFactory();
      Session session = factory.getSession();
     
      try {
         session.init("");
         JobTemplate jt = session.createJobTemplate();
         jt.setRemoteCommand("sleeper.sh");
         jt.setArgs(Collections.singletonList("5"));
        
         String id = session.runJob(jt);
        
         System.out.println("Your job has been submitted with id " + id);
        
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      SessionFactory factory = SessionFactory.getFactory();
      Session session = factory.getSession();
     
      try {
         session.init("");
         JobTemplate jt = session.createJobTemplate();
         jt.setRemoteCommand("sleeper.sh");
         jt.setArgs(Collections.singletonList("5"));
        
         int start = 1;
         int end  = 30;
         int step = 2;
        
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Related Classes of org.ggf.drmaa.JobTemplate

  • com.sun.grid.drmaa.howto.Howto2
  • com.sun.grid.drmaa.howto.Howto2_1
  • com.sun.grid.drmaa.howto.Howto3
  • com.sun.grid.drmaa.howto.Howto3_1
  • com.sun.grid.drmaa.howto.Howto3_2
  • com.sun.grid.drmaa.howto.Howto4
  • com.sun.grid.drmaa.howto.Howto5
  • DrmaaExample
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