Examples of org.broadinstitute.gatk.tools.walkers.na12878kb.core.TruthStatus

    public void renderSiteBand(Variant variant, Rectangle bandRectangle, int pixelX, int xWidth, RenderContext context) {
        super.renderSiteBand(variant, bandRectangle, pixelX, xWidth, context);


        if(variant instanceof MongoVCFVariant){
            MongoVCFVariant mvc = (MongoVCFVariant) variant;
            TruthStatus truthStatus = mvc.getTruthStatus();


            int bandY = calculateBottomYSiteBand(bandRectangle);
            int bandHeight = calculateBarHeightSiteBand(bandRectangle);


            Graphics2D g = context.getGraphic2DForColor(Color.black);

     * @param e
     */
    private void okButtonActionPerformed(ActionEvent e) {


        String callsetName = callsetField.getText();
        TruthStatus truthStatus = (TruthStatus) truthField.getSelectedItem();
        boolean isComplexEvent = isComplexEventCB.isSelected();


        int allele0 = -1;
        int allele1 = -1;

Related Classes of org.broadinstitute.gatk.tools.walkers.na12878kb.core.TruthStatus

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