Rectangle panelClip = visibleRect;
List<ExomeBlock> blocks = exomeFrame.getBlocks();
int idx = exomeFrame.getFirstBlockIdx();
RenderContext exomeContext = new RenderContextImpl(null, null, frame, visibleRect);
preloadTracks(groups, exomeContext, visibleRect);
ExomeBlock b;
int lastPStart = 0;
int pStart;
int pEnd;
int exomeOrigin = ((ExomeReferenceFrame) frame).getExomeOrigin();
int visibleBlockCount = 0;
do {
b = blocks.get(idx);
pStart = (int) ((b.getExomeStart() - exomeOrigin) / frame.getScale()) + visibleBlockCount * blockGap;
pEnd = (int) ((b.getExomeEnd() - exomeOrigin) / frame.getScale()) + visibleBlockCount * blockGap;
if (pEnd > lastPStart) {
lastPStart = pStart;
// Don't draw over previously drawn region -- can happen when zoomed out.
if (pEnd == pStart) pEnd++;
b.setScreenBounds(pStart, pEnd);
Rectangle rect = new Rectangle(pStart, visibleRect.y, pEnd - pStart, visibleRect.height);
Graphics2D exomeGraphics = (Graphics2D) context.getGraphics().create();
//Shape clip = exomeGraphics.getClip();
// Color c = ColorUtilities.randomColor(idx);
// exomeGraphics.setColor(c);
// exomeGraphics.fill(rect);
// exomeGraphics.setColor(Color.black);
// GraphicUtils.drawCenteredText(String.valueOf(idx), rect, exomeGraphics);
exomeGraphics.setClip(rect.intersection(panelClip));
exomeGraphics.translate(pStart, 0);
ReferenceFrame tmpFrame = new ReferenceFrame(frame);
tmpFrame.setOrigin(b.getGenomeStart());
RenderContext tmpContext = new RenderContextImpl(null, exomeGraphics, tmpFrame, rect);
paintFrame(groups, tmpContext, rect.width, rect);
tmpContext.dispose();
exomeGraphics.dispose();
visibleBlockCount++;
}
idx++;