Package org.broad.igv.ga4gh

Examples of org.broad.igv.ga4gh.Ga4ghAlignmentReader


                throw new RuntimeException("Cannot load Goby alignment " + locator.getPath(), e);

            }
        } else if (Ga4ghAlignmentReader.supportsFileType(locator.getType())) {
            Ga4ghProvider provider = (Ga4ghProvider) locator.getAttribute("provider");
            return new Ga4ghAlignmentReader(provider, locator.getPath());
        }

        else {
            throw new RuntimeException("Cannot find reader for aligment file: " + locator.getPath());
        }
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Related Classes of org.broad.igv.ga4gh.Ga4ghAlignmentReader

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