Package org.broad.igv.data

Examples of org.broad.igv.data.DatasetDataSource


        }
        Assume.assumeTrue(genome != null);


        WiggleDataset ds = (new WiggleParser(new ResourceLocator(wigPath), genome)).parse();
        DatasetDataSource wigSource = new DatasetDataSource(wigPath, ds, genome);


        TDFReader tdfReader = TDFReader.getReader(tdfPath);
        TDFDataSource tdfSource = new TDFDataSource(tdfReader, 0, tdfPath, genome);

        //We can't test for exact equality, so we just look for errors
        List<LocusScore> wigScores = wigSource.getSummaryScoresForRange(Globals.CHR_ALL, -1, -1, 0);
        List<LocusScore> tdfScores = tdfSource.getSummaryScoresForRange(Globals.CHR_ALL, -1, -1, 0);

        assertEquals(expHaveChrAll, tdfSource.isChrOrderValid());

        if(!expHaveChrAll){
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