Package org.bioinfo.ngs.qc.qualimap.process.EpiAnalysis

Examples of org.bioinfo.ngs.qc.qualimap.process.EpiAnalysis.ReplicateItem


            regionsField.setText("/home/kokonech/sample_data/clustering_sample/CpGIslandsByTakai.wihtNames.short.bed");

            experimentName.setText("24h-i");

            // add some preliminary data
            EpiAnalysis.ReplicateItem item1 = new ReplicateItem();
            item1.name = "24h-i_1";
            item1.medipPath = "/home/kokonech/qualimapEpi/src/medip/mapping/24h-i-medip_1.uniq.sorted.noDup.bam.small";
            item1.inputPath = "/home/kokonech/qualimapEpi/src/medip/mapping/24h-i-input.uniq.sorted.noDup.bam.small";
            addDataItem(item1);

            ReplicateItem item2 = new EpiAnalysis.ReplicateItem();
            item2.name = "24h-i_2";
            item2.medipPath = "/home/kokonech/qualimapEpi/src/medip/mapping/24h-i-medip_2.uniq.sorted.noDup.bam.small";
            item2.inputPath = "/home/kokonech/qualimapEpi/src/medip/mapping/24h-i-input.uniq.sorted.noDup.bam.small";
            addDataItem(item2);
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Related Classes of org.bioinfo.ngs.qc.qualimap.process.EpiAnalysis.ReplicateItem

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