Examples of org.apache.airavata.model.appcatalog.computeresource.ResourceJobManager

Package org.apache.airavata.model.appcatalog.computeresource

Examples of org.apache.airavata.model.appcatalog.computeresource.ResourceJobManager

org.apache.airavata.model.appcatalog.computeresource.ResourceJobManager
Resource Job Manager Information resourceJobManagerType: A typical HPC cluster has a single Job Manager to manage the resources. pushMonitoringEndpoint: If the job manager pushes out state changes to a database or bus, specify the service endpoint. Ex: Moab Web Service, Moab MongoDB URL, AMQP (GLUE2) Broker jobManagerBinPath: Path to the Job Manager Installation Binary directory. jobManagerCommands: An enumeration of commonly used manager commands.

      r.setResourceJobManagerType(manager.getResourceJobManagerType().toString());
      return r;
    }
    
    public static ResourceJobManager getResourceJobManager(ResourceJobManagerResource manager) throws AppCatalogException{
      ResourceJobManager r = new ResourceJobManager();
      r.setResourceJobManagerId(manager.getResourceJobManagerId());
      r.setJobManagerBinPath(manager.getJobManagerBinPath());
      r.setPushMonitoringEndpoint(manager.getPushMonitoringEndpoint());
      r.setResourceJobManagerType(ResourceJobManagerType.valueOf(manager.getResourceJobManagerType()));
      r.setJobManagerCommands(new HashMap<JobManagerCommand, String>());
      JobManagerCommandResource jmcr=new JobManagerCommandResource();
        List<Resource> jmcrList = jmcr.get(AbstractResource.JobManagerCommandConstants.RESOURCE_JOB_MANAGER_ID, manager.getResourceJobManagerId());
        if (jmcrList != null && !jmcrList.isEmpty()){
          for (Resource rrr : jmcrList) {
            JobManagerCommandResource rr=(JobManagerCommandResource)rrr;
            r.getJobManagerCommands().put(JobManagerCommand.valueOf(rr.getCommandType()), rr.getCommand());
      }
        }
      return r;
    }

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  public static ResourceJobManager createResourceJobManager(
      ResourceJobManagerType resourceJobManagerType,
      String jobManagerBinPath,
      Map<JobManagerCommand, String> jobManagerCommands,
      String pushMonitoringEndpoint) {
    ResourceJobManager resourceJobManager=new ResourceJobManager();;
    resourceJobManager.setResourceJobManagerType(resourceJobManagerType);
    resourceJobManager.setJobManagerBinPath(jobManagerBinPath);
    resourceJobManager.setJobManagerCommands(jobManagerCommands);
    resourceJobManager.setPushMonitoringEndpoint(pushMonitoringEndpoint);
    return resourceJobManager;
  }

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                "localhost", new HashSet<String>(Arrays.asList(new String[]{"127.0.0.1"})), new HashSet<String>(Arrays.asList(new String[]{"127.0.0.1"})));
//      host.setIsEmpty(true);
        host.setComputeResourceId(client.registerComputeResource(host));


        LOCALSubmission localSubmission = new LOCALSubmission();
        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.FORK, null, null, null);
        localSubmission.setResourceJobManager(resourceJobManager);
        client.addLocalSubmissionDetails(host.getComputeResourceId(), 1, localSubmission);


        LOCALDataMovement localDataMovement = new LOCALDataMovement();
        client.addLocalDataMovementDetails(host.getComputeResourceId(), 1, localDataMovement);

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        SSHJobSubmission jobSubmission = new SSHJobSubmission();
        jobSubmission.setSshPort(22);
        jobSubmission.setSecurityProtocol(SecurityProtocol.SSH_KEYS);
        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.FORK, null, null, null);
        jobSubmission.setResourceJobManager(resourceJobManager);
        client.addSSHJobSubmissionDetails(host.getComputeResourceId(), 1, jobSubmission);


        SCPDataMovement scpDataMovement = new SCPDataMovement();
        scpDataMovement.setSecurityProtocol(SecurityProtocol.SSH_KEYS);

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        host.addToIpAddresses(trestleshpcHostAddress);
        host.addToHostAliases(trestleshpcHostAddress);
        host.setComputeResourceId(client.registerComputeResource(host));


        SSHJobSubmission sshJobSubmission = new SSHJobSubmission();
        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.PBS, "/opt/torque/bin/", null, null);
        sshJobSubmission.setResourceJobManager(resourceJobManager);
        sshJobSubmission.setSecurityProtocol(SecurityProtocol.GSI);
        sshJobSubmission.setSshPort(22);
        client.addSSHJobSubmissionDetails(host.getComputeResourceId(), 1, sshJobSubmission);

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        host.addToIpAddresses(trestleshpcHostAddress);
        host.addToHostAliases(trestleshpcHostAddress);
        host.setComputeResourceId(client.registerComputeResource(host));


        SSHJobSubmission sshJobSubmission = new SSHJobSubmission();
        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.PBS, "/opt/torque/bin/", null, null);
        sshJobSubmission.setResourceJobManager(resourceJobManager);
        sshJobSubmission.setSecurityProtocol(SecurityProtocol.GSI);
        sshJobSubmission.setSshPort(22);
        client.addSSHJobSubmissionDetails(host.getComputeResourceId(), 1, sshJobSubmission);

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        ComputeResourceDescription host = DocumentCreatorUtils.createComputeResourceDescription(stampedeHostAddress, null, null);
        host.addToHostAliases(stampedeHostAddress);
        host.addToIpAddresses(stampedeHostAddress);
        host.setComputeResourceId(client.registerComputeResource(host));


        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.SLURM, "/usr/bin/", null, "push");
        SSHJobSubmission sshJobSubmission = new SSHJobSubmission();
        sshJobSubmission.setResourceJobManager(resourceJobManager);
        sshJobSubmission.setSecurityProtocol(SecurityProtocol.GSI);
        sshJobSubmission.setSshPort(2222);

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        ComputeResourceDescription host = DocumentCreatorUtils.createComputeResourceDescription(stampedeHostAddress, null, null);
        host.addToHostAliases(stampedeHostAddress);
        host.addToIpAddresses(stampedeHostAddress);
        host.setComputeResourceId(client.registerComputeResource(host));


        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.SLURM, "/usr/bin/", null, "push");
        SSHJobSubmission sshJobSubmission = new SSHJobSubmission();
        sshJobSubmission.setResourceJobManager(resourceJobManager);
        sshJobSubmission.setSecurityProtocol(SecurityProtocol.GSI);
        sshJobSubmission.setSshPort(2222);
        client.addSSHJobSubmissionDetails(host.getComputeResourceId(), 1, sshJobSubmission);

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        ComputeResourceDescription host = DocumentCreatorUtils.createComputeResourceDescription(lonestarHostAddress, null, null);
        host.addToHostAliases(lonestarHostAddress);
        host.addToIpAddresses(lonestarHostAddress);
        host.setComputeResourceId(client.registerComputeResource(host));


        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.UGE, "/opt/sge6.2/bin/lx24-amd64/", null, null);
        SSHJobSubmission sshJobSubmission = new SSHJobSubmission();
        sshJobSubmission.setResourceJobManager(resourceJobManager);
        sshJobSubmission.setSecurityProtocol(SecurityProtocol.GSI);
        sshJobSubmission.setSshPort(22);

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        host.setComputeResourceId(client.registerComputeResource(host));




        Map<JobManagerCommand, String> commands = new HashMap<JobManagerCommand, String>();
        commands.put(JobManagerCommand.SUBMISSION, "aprun -n 1");
        ResourceJobManager resourceJobManager = DocumentCreatorUtils.createResourceJobManager(ResourceJobManagerType.UGE, "/opt/torque/torque-4.2.3.1/bin/", commands, null);
        SSHJobSubmission sshJobSubmission = new SSHJobSubmission();
        sshJobSubmission.setResourceJobManager(resourceJobManager);
        sshJobSubmission.setSecurityProtocol(SecurityProtocol.SSH_KEYS);
        sshJobSubmission.setSshPort(22);

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