Examples of net.sf.pipet.api.Pipeline

net.sf.pipet.api.Pipeline
The interface implemented by pipelines. The main components that constitute a pipeline are the following:
- modules, the processing units;
- connectors which link the modules; and
- input and output ports (optional): if an input or output port is defined, the pipeline can act as a module in another pipeline, using input from or sending output to other modules in the embedding pipeline.

    return pipeline;
  }
  
  public Map<String,String> getPipeTypes(ModuleAttributes atts, boolean use_input) throws ResourceException
  {
    Pipeline p = getPipeline(atts);
    if (p == null)
      return Collections.emptyMap();
    
    String default_ctype = use_input ? MimeType.ANY : MimeType.UNKNOWN;
    
    Map<String,Collection<Plug>> pipes = use_input ? p.getInputPipes() : p.getOutputPipes();
    
    Map<String,String> types = new HashMap<String,String>();
    for (Map.Entry<String, Collection<Plug>> e : pipes.entrySet())
    {
      if (e.getValue().isEmpty())

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  @Override
  public Map<String,ParameterType<?>> getRuntimeParameters(ModuleAttributes atts) throws ResourceException
  {
    Map<String,ParameterType<?>> params = new HashMap<String,ParameterType<?>>();
    
    Pipeline p = getPipeline(atts);
    if (p != null)
    {
      for (ModuleDefinition mod : p.getModules())
        params.putAll(mod.getRuntimeParameters());
    }
    
    return params;
  }

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  }


  @Override
  public String getDefaultDescription(ModuleAttributes atts)
  {
    Pipeline p = getPipeline(atts);
    if (p != null)
      return String.format("%s (pipeline)", p.getName());
    else
      return "unresolved pipeline";
  }

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    List<Field> fields = new Vector<Field>();
    fields.add(FLD_DESC);
    if (pipelinename == null)
      fields.add(FLD_PIPELINE);
    
    Pipeline pipeline = getPipeline(null);
    if (pipeline != null && pipeline.useAutomaticConnections())
    {
      fields.add(FLD_INPUT_PIPES);
      fields.add(FLD_OUTPUT_PIPES);
    }

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  private void createNewPipeline()
  {
    String name = getNewPipelineName();
    if (name != null)
    {
      Pipeline p = pipesetup.newPipeline(name);
      showPipeline(p);
      rebuildPipelineMenu();
    }
  }

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    }
  }
  
  private void clonePipeline()
  {
    Pipeline source = getSelectedPipeline();
    if (source == null)
      return;
    
    String name = getNewPipelineName();
    if (name == null)
      return;
    
    Pipeline target = pipesetup.newPipeline(name, source);
    showPipeline(target);
    rebuildPipelineMenu();
  }

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    }
  }
  
  private void deletePipeline()
  {
    Pipeline p = getSelectedPipeline();
    if (p != null)
    {
      pipesetup.removePipeline(p.getName());
      closeTab();
      rebuildPipelineMenu();
    }
  }

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      closeTab(selected);
  }
  
  private void closeTab(Tab tab)
  {
    Pipeline p = tab.getPipeline();
    tab.close();
    if (p != null)
    {
      pipeline_graphs.remove(p);
      pipeline_tables.remove(p);

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    componentCountChanged();
  }
  
  private void showPipelineGraphView()
  {
    Pipeline p = getSelectedPipeline();
    if (p != null)
      showPipelineGraphView(p);
  }

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      showPipelineGraphView(p);
  }
  
  private void showPipelineTableView()
  {
    Pipeline p = getSelectedPipeline();
    if (p != null)
      showPipelineTableView(p);
  }

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Related Classes of net.sf.pipet.api.Pipeline

net.sf.pipet.app.PipetCommand

net.sf.pipet.config.ConfigurationImpl

net.sf.pipet.config.ConfigurationV0Parser

net.sf.pipet.gui.PipelineBuilderMain

net.sf.pipet.modules.EmbeddedPipeline

net.sf.pipet.resources.PipelineResourcePlugin

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