Package net.sf.picard.reference

Examples of net.sf.picard.reference.ReferenceSequenceFileWalker

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      this.pairEndInfoByName = new CoordinateSortedPairEndInfoMap();
    } else {
      this.pairEndInfoByName = new InMemoryPairEndInfoMap();
    }
    if (reference != null) {
      this.refFileWalker = new ReferenceSequenceFileWalker(reference);
    }
  }
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Related Classes of net.sf.picard.reference.ReferenceSequenceFileWalker

  • net.sf.picard.sam.SamFileValidator
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