Package net.sf.block

Examples of net.sf.block.FormatFactory


    Definition definition = new Definition();
    definition.contentId = "input.bam".getBytes();
    definition.formatMajor = 1;
    definition.formatMinor = 0;
    definition.magick = "CRAM".getBytes();
    Format format = new FormatFactory().createFormat(definition);

    SAMRecord samRecord = null;
    CramHeader cramHeader = createCramHeader(reader.getFileHeader());
    ByteArrayOutputStream hBaos= new ByteArrayOutputStream() ;
    Container hC = new Container() ;
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