Package info.unipax.bina.networkanalysis

Examples of info.unipax.bina.networkanalysis.NetworkAnalysisWorkspace

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  /**
   * Look for all proteins in the network and group them
   * */ 
  private void performAnalysis()
  {
    NetworkAnalysisWorkspace workspace = NetworkAnalysisWorkspace.getInstance(Activator.getBundleContext());
     
    if(controller!=null)
    {
      controller.getVisualization().getView().fitContent();     
      controller.getVisualization().getView().updateView();
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    t.addTask(new Task("collapse")
    {
      public void run()
      {   
        NetworkAnalysisWorkspace workspace = NetworkAnalysisWorkspace.getInstance(Activator.getBundleContext());
        Controller<?> activeController = workspace.getActiveController();
   
        if (activeController instanceof StandardController)
        {
          controller = (StandardController) activeController;
        }
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  /**
   * Insert background.
   * */
  private void insertBackground()
  {       
    NetworkAnalysisWorkspace workspace = NetworkAnalysisWorkspace.getInstance(Activator.getBundleContext());
    Controller<?> activeController = workspace.getActiveController();
         
    if (activeController instanceof StandardController)
    {
      controller = (StandardController) activeController;
    }     
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