Package htsjdk.samtools.seekablestream

Examples of htsjdk.samtools.seekablestream.SeekableHTTPStream

257
258
259
260
261
262
263
264
265
266
267
        unBufferedStream.seek(startPosition);
        int bytesRead = unBufferedStream.read(buffer1, 0, length);
        assertEquals(length, bytesRead);

        byte[] buffer2 = new byte[length];
        SeekableStream bufferedStream = new IGVSeekableBufferedStream(new SeekableHTTPStream(new URL(BAM_URL_STRING)));
        bufferedStream.seek(startPosition);
        bytesRead = bufferedStream.read(buffer2, 0, length);
        assertEquals(length, bytesRead);

        assertArraysEqual(buffer1, buffer2);
View Full Code Here
282
283
284
285
286
287
288
289
290
291
292
        long startPosition = fileLength - remainder;
        int length = 1000;


        byte[] buffer = new byte[length];
        SeekableStream bufferedStream = new IGVSeekableBufferedStream(new SeekableHTTPStream(new URL(BAM_URL_STRING)));
        bufferedStream.seek(startPosition);
        int bytesRead = bufferedStream.read(buffer, 0, length);
        assertEquals(remainder, bytesRead);

        // Subsequent reads should return -1
View Full Code Here
TOP

Related Classes of htsjdk.samtools.seekablestream.SeekableHTTPStream

  • org.broad.igv.util.stream.IGVSeekableBufferedStreamTest
    • Copyright © 2018 www.massapicom. All rights reserved.
    All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.