Package eu.isas.peptideshaker.gui.protein_sequence

Examples of eu.isas.peptideshaker.gui.protein_sequence.ProteinSequencePanel

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                            }

                            sparkLineDataSeriesCoverage.add(sparklineDataseries);
                        }

                        ChartPanel coverageChart = new ProteinSequencePanel(Color.WHITE).getSequencePlot(this, new JSparklinesDataset(sparkLineDataSeriesCoverage),
                                new HashMap<Integer, ArrayList<ResidueAnnotation>>(), true, true);

                        ((DefaultTableModel) coverageTable.getModel()).addRow(new Object[]{(i + 1), fileNames.get(i), coverageChart});

                        if (fileNames.get(i).length() > longestFileName) {
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                }
                blocTooltips.put(blocCpt, blocAnnotation);
                blocCpt++;
            }

            coverageChart = new ProteinSequencePanel(Color.WHITE).getSequencePlot(this, new JSparklinesDataset(sparkLineDataSeriesCoverage), blocTooltips, true, true);

            // make sure that the range is the same for both charts (coverage and ptm)
            coverageChart.getChart().addChangeListener(new ChartChangeListener() {
                @Override
                public void chartChanged(ChartChangeEvent cce) {
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                    data.add(new Double(unmodifiedCounter));
                    sparklineDataseriesPtm = new JSparklinesDataSeries(data, new Color(0, 0, 0, 0), null);
                    sparkLineDataSeriesPtm.add(sparklineDataseriesPtm);
                }

                ptmChart = new ProteinSequencePanel(Color.WHITE).getSequencePlot(this, new JSparklinesDataset(sparkLineDataSeriesPtm), proteinTooltips, false, false);
                sequencePtmsPanel.removeAll();
                sequencePtmsPanel.add(ptmChart);
                sequencePtmsPanel.revalidate();
                sequencePtmsPanel.repaint();
            } catch (ClassCastException e) {
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Related Classes of eu.isas.peptideshaker.gui.protein_sequence.ProteinSequencePanel

  • eu.isas.peptideshaker.gui.tabpanels.OverviewPanel
  • eu.isas.peptideshaker.gui.tabpanels.ProteinFractionsPanel
  • no.uib.jsparklines.data.JSparklinesDataSeries
  • org.jfree.chart.labels.CategoryToolTipGenerator
  • org.jfree.chart.labels.IntervalCategoryToolTipGenerator
  • org.jfree.chart.plot.CategoryPlot
  • org.jfree.chart.renderer.category.LayeredBarRenderer
  • org.jfree.chart.renderer.category.StackedBarRenderer
  • org.jfree.data.category.DefaultCategoryDataset
  • java.awt.Color
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