Package edu.ucdavis.genomics.metabolomics.util.math

Examples of edu.ucdavis.genomics.metabolomics.util.math.Similarity

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          .getIntensity();
      bigSpectrum[i][Similarity.FRAGMENT_REL_POSITION] = p[i]
          .getIntensity() / maxAbundance * 100;
    }

    Similarity similarity = getFameSpectrum(name).getSimilarity();
    double sim;

    synchronized (similarity) {
      similarity.setUnknownSpectra(bigSpectrum);
      sim = similarity.calculateSimimlarity();
    }

    return sim;
  }
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      this.name = name;
      this.retentionTime = retentionTime;
      this.retentionIndex = retentionIndex;
      this.spectrum = parseSpectrumData(spectrum);

      similarity = new Similarity();
      similarity.setLibrarySpectra(spectrum);
    }
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Related Classes of edu.ucdavis.genomics.metabolomics.util.math.Similarity

  • net.sf.mzmine.modules.deconvolutedanalysis.famealignment.FameData
  • net.sf.mzmine.modules.deconvolutedanalysis.famealignment.FameData$FameMassSpectrum
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