Examples of edu.stanford.bmir.protege.web.server.notes.converter.CHAO2NotesConverter

edu.stanford.bmir.protege.web.server.notes.converter.CHAO2NotesConverter

ge.stanford.edu/ontologies/ChAO/changes.owl#>

First, we have a dummy individual that represents the entity (IRI) being annotated. For classes these are typed with p:Ontology_Class and a data property value pointing to a string corresponding to the IRI of the class.

:i rdf:type p:Ontology_Class
:i p:currentName "current name literal - IRI lexical value"

Then we have the "Note Individual" :n
and we specify what the note replies to
:n p:annotates :i

Specify the various field for the note
:n p:createdAt "Created at literal format is mm/dd/yyyy hh:mm:ss z"
:n p:author "Author name literal"
:n p:subject "Subject literal"
:n p:body "Body literal" .

Caveats: For ChAO ontologies exported from WebProtege, the prefix p: may actually (in some cases) bind to a different base.

            try {
                final BufferedInputStream inputStream = new BufferedInputStream(new FileInputStream(legacy));
                OWLOntology legacyNotesOntology = WebProtegeOWLManager.createOWLOntologyManager().loadOntologyFromOntologyDocument(inputStream);
                String base = legacyNotesOntology.getOntologyID().getOntologyIRI().toString();
                LOGGER.info(project.getProjectId(), "Using base obtained from legacy notes ontology: " + base);
                CHAO2NotesConverter converter = new CHAO2NotesConverter(project.getRootOntology(), legacyNotesOntology, base);
                converter.convertToNotes(this);
                inputStream.close();
                FileUtils.moveFile(legacy, new File(legacy.getParentFile(), "notes-data.legacy.imported-" + System.currentTimeMillis()));
                LOGGER.info(project.getProjectId(), "Import completed");
            }
            catch (Exception e) {

Examples of edu.stanford.bmir.protege.web.server.notes.converter.CHAO2NotesConverter

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