Package edu.mayo.bmi.guoqian.claml

Examples of edu.mayo.bmi.guoqian.claml.Meta


          Identifier identifier = factory.createIdentifier();
          identifier.setAuthority("WHO");
          identifier.setUid("id-to-be-added-later");
          claml.getIdentifier().add(identifier);
         
          Meta meta = factory.createMeta();
          meta.setName("lang");
          meta.setValue("en");
          claml.getMeta().add(meta);

          Meta metaTop = factory.createMeta();
          metaTop.setName("TopLevelSort");
          metaTop.setValue("I II III IV V VI VII VIII IX X XI XII XIII XIV XV XVI XVII XVIII XIX XX XXI XXII");
          claml.getMeta().add(metaTop)
         
         
          ClassKinds clsKinds = factory.createClassKinds();
      ClassKind cKind1 = factory.createClassKind();
      cKind1.setName("chapter");
      clsKinds.getClassKind().add(cKind1);
      ClassKind cKind2 = factory.createClassKind();
      cKind2.setName("block");
      clsKinds.getClassKind().add(cKind2);
      ClassKind cKind3 = factory.createClassKind();
      cKind3.setName("category");
      clsKinds.getClassKind().add(cKind3);
      //ClassKind cKind4 = factory.createClassKind();
      //cKind4.setName("modifiedcategory");
      //clsKinds.getClassKind().add(cKind4);

      claml.setClassKinds(clsKinds);
         
          /*
          UsageKinds useKinds = factory.createUsageKinds();
          UsageKind useKind = factory.createUsageKind();
          useKind.setMark("!");
          useKind.setName("optional");
          useKinds.getUsageKind().add(useKind);
          claml.setUsageKinds(useKinds);
          */
          RubricKinds rubKinds = factory.createRubricKinds();
        
          //preferred
          RubricKind rKind1 = factory.createRubricKind();
          rKind1.setInherited("false");
          rKind1.setName(icdContentModel.getPreferredProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind1);
         
          //synonym property
          /*
          RubricKind rKind1_1 = factory.createRubricKind();
          rKind1_1.setInherited("false");
          rKind1_1.setName(icdContentModel.getSynonymProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind1_1);
          */
         
          //definition property
          RubricKind rKind1_2 = factory.createRubricKind();
          rKind1_2.setInherited("false");
          rKind1_2.setName(icdContentModel.getDefinitionProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind1_2);
         
          //prefilled definition property
          /*
          RubricKind rKind1_3 = factory.createRubricKind();
          rKind1_3.setInherited("false");
          rKind1_3.setName(icdContentModel.getPrefilledDefinitionProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind1_3);
          */
         
          //inclusion
          RubricKind rKind2 = factory.createRubricKind();
          rKind2.setInherited("false");
          rKind2.setName(icdContentModel.getInclusionProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind2);
         
          //exclusion
          RubricKind rKind3 = factory.createRubricKind();
          rKind3.setInherited("false");
          rKind3.setName(icdContentModel.getExclusionProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind3);
         
          //note property
          RubricKind rKind5 = factory.createRubricKind();
          rKind5.setInherited("false");
          rKind5.setName(icdContentModel.getNoteProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind5);
         
          //MorbidityParent property
          /*
          RubricKind rKind6 = factory.createRubricKind();
          rKind6.setInherited("false");
          rKind6.setName(icdContentModel.getMorbidityParentProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind6);
          */
         
          //coding hint property
          RubricKind rKind7 = factory.createRubricKind();
          rKind7.setInherited("false");
          rKind7.setName(icdContentModel.getCodingHintProperty().getBrowserText());
          rubKinds.getRubricKind().add(rKind7);
         

         
          //icd Reference property
          //RubricKind rKind9 = factory.createRubricKind();
          //rKind9.setInherited("false");
          //rKind9.setName(icdContentModel.getIcdRefProperty().getBrowserText());
          //rubKinds.getRubricKind().add(rKind9);
         
       
          //set rubric kinds
          claml.setRubricKinds(rubKinds);
         
         
         
         
          //iterating icd categories
         
          int index = 1;
          for(Iterator it = icdCategories.iterator(); it.hasNext();){
           
            RDFSNamedClass icdCategory = (RDFSNamedClass) it.next();
           
            if(this.mapGeneratedCodes.containsKey(icdCategory)){ //only those categories with codes
     
            //is included?
            //if(this.isIncludedInLinearizationForType(icdCategory, linearizationType)){
           
           
              //RDFSNamedClass icdCategory = icdContentModel.getICDCategory("http://who.int/icd#I82.0");
              //System.out.println("Displayed as in the tree: " + icdCategory.getBrowserText());
           
              //System.out.println(index++ + "|" + icdCategory.getBrowserText());
           
              edu.mayo.bmi.guoqian.claml.Class cls = factory.createClass();

              /*
              //get original code, if not availabel it is "TBD"
              String classCode = getClassCode(icdCategory);
             
              //if the code is "TBD", then find it from generated codes
              if(classCode.equals("TBD")){
                String generatedCode = (String)this.mapGeneratedCodes.get(icdCategory);
                if(generatedCode != null){
                  classCode = generatedCode;
                }else{// in case, no code generated
                  System.out.println("Code not generated for:" + icdCategory.getBrowserText());
                }
              }
              */
             
              String classCode = (String) this.mapGeneratedCodes.get(icdCategory);
             
              cls.setCode(classCode);
             
             
              String cKindName = getClassKind(icdCategory);
             
            ClassKind cKind = factory.createClassKind();
            cKind.setName(cKindName);
            cls.setKind(cKind);
           
           
            //meta icat id
                Meta metaICatId = factory.createMeta();
                metaICatId.setName("iCatID");
                metaICatId.setValue(icdCategory.getName());
                cls.getMeta().add(metaICatId);

           
/*           
            //superclass codes    
View Full Code Here


    /**
     * Create an instance of {@link Meta }
     *
     */
    public Meta createMeta() {
        return new Meta();
    }
View Full Code Here

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