Examples of cysbml.SBMLFilter

  /** Get a list of all SBML files in the given testFolder */ 
  public AllCases(String folderName){
    testFolder = new File(folderName);
    // Get all SBML files in the testFolder and subfolders sorted by name
    sbmlFiles = new HashMap<String, File>();
    getFilesInDirectory(testFolder, new SBMLFilter());
  }

  }
  
  private void addFilterForSBML(){
    // Test if SBMLReader is set in Import filters and give warning if other filter is set
    ImportHandler ih = Cytoscape.getImportHandler();
    SBMLFilter filter = new SBMLFilter();
    Set<String> extensions = filter.getExtensionSet();
    for (String extension : extensions) {
      if (ih.getAllExtensions().contains(extension) && !extension.equals("xml")) {
        System.out.println("Extension : " + extension); 
        String msg = 
             "Currently SBMLReader is still registered with 'sbml & 'xml' files.\n" +

Related Classes of cysbml.SBMLFilter

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