Package common

Examples of common.LinearSizePenalty


    double[] data = dclong.io.BinaryReader.readDouble(dataFile, 0, 0, n);
    int[] initArrayPartition = dclong.io.BinaryReader.readInt(iapFile,0,0,n);
    //define partition prior
    FragmentPenalty fragmentPenalty = new PowerFragmentPenalty(1,90);
    //define size penalty
    SizePenalty sizePenalty = new LinearSizePenalty(0);
    //define partition prior
//    PartitionPrior partitionPrior = new DistPartitionPrior(locs,3,fragmentPenalty,sizePenalty);
    PartitionPrior fragPrior = new FragmentPartitionPrior(fragmentPenalty);
    //define tuning distribution
    RandomGenerator rg = new Well44497b();
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Related Classes of common.LinearSizePenalty

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