Package com.compomics.util.pride.prideobjects

Examples of com.compomics.util.pride.prideobjects.Instrument

984
985
986
987
988
989
990
991
992
993
994
995
     * @param evt
     */
    private void editInstrumentJButtonActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_editInstrumentJButtonActionPerformed
        // get the selected instrument details
        String selectedInstrument = (String) instrumentJComboBox.getSelectedItem();
        Instrument tempInstrument = prideObjectsFactory.getInstruments().get(selectedInstrument);
        if (tempInstrument == null) {
            tempInstrument = new Instrument("New instrument", null, null, null);
        }

        new NewInstrumentDialog(this, true, tempInstrument);
    }//GEN-LAST:event_editInstrumentJButtonActionPerformed
View Full Code Here
1056
1057
1058
1059
1060
1061
1062
1063
1064
1065
1066
                String selectedProtocol = (String) protocolJComboBox.getSelectedItem();
                Protocol protocol = prideObjectsFactory.getProtocols().get(selectedProtocol);

                // get the selected instrument details
                String selectedInstrument = (String) instrumentJComboBox.getSelectedItem();
                Instrument instrument = prideObjectsFactory.getInstruments().get(selectedInstrument);

                // save the inserted pride details with the project
                peptideShakerGUI.getProjectDetails().setPrideExperimentTitle(titleJTextField.getText());
                peptideShakerGUI.getProjectDetails().setPrideExperimentLabel(labelJTextField.getText());
                peptideShakerGUI.getProjectDetails().setPrideExperimentProjectTitle(projectJTextField.getText());
View Full Code Here
661
662
663
664
665
666
667
668
669
670
671
        String tempDetector = instrumentDetectorJTextField.getText();
        String termDetector = tempDetector.substring(0, tempDetector.lastIndexOf("[") - 1);
        String accessionDetector = tempDetector.substring(tempDetector.lastIndexOf("[") + 1, tempDetector.lastIndexOf("]"));
        String ontologyDetector = ProjectExportDialog.getOntologyFromCvTerm(accessionDetector);

        prideExportDialog.setInstrument(new Instrument(nameJTextField.getText(),
                new CvTerm(ontologySource, accessionSource, termSource, null),
                new CvTerm(ontologyDetector, accessionDetector, termDetector, null),
                cvTerms));
        dispose();
    }//GEN-LAST:event_okJButtonActionPerformed
View Full Code Here
702
703
704
705
706
707
708
     *
     * @param evt
     */
    private void deleteButtonActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_deleteButtonActionPerformed
        dispose();
        prideExportDialog.deleteInstrument(new Instrument(nameJTextField.getText(), null, null, new ArrayList<CvTerm>()));
    }//GEN-LAST:event_deleteButtonActionPerformed
View Full Code Here
TOP

Related Classes of com.compomics.util.pride.prideobjects.Instrument

  • eu.isas.peptideshaker.gui.pride.annotationdialogs.NewInstrumentDialog
  • eu.isas.peptideshaker.gui.pride.ProjectExportDialog
    • Copyright © 2018 www.massapicom. All rights reserved.
    All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.